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STIFDB - 1000bp Information | TAIR Gene ID: AT5G57890

STIFdb - 1000bp TFmap : AT5G57890

AT5G57890_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G57890

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.71281.233/ 24622 -383-378 Upstream regionReverse
2 Myb_box5_MYB 1.71281.233/ 24622 3742 5'UTRReverse
3 Myb_box5_MYB 1.71281.233/ 24622 -55-50 Upstream regionForward
4 Myb_box5_MYB 1.71281.233/ 24622 -32 Upstream regionReverse
5 Myb_box5_MYB 1.71281.233/ 24622 -75-70 Upstream regionForward
6 DREB_AP2_EREBP 3.08861.615/ 24622 -917-912 Upstream regionReverse
7 G_box2_bZIP 2.57661.580/ 24622 -540-535 Upstream regionForward
8 Myb_box1_MYB 1.81230.607/ 24622 -75-70 Upstream regionForward
9 AuxRE_ARF 2.52810.860/ 24622 -594-589 Upstream regionReverse
10 N_box_bHLH 3.07172.378/ 24622 -605-600 Upstream regionReverse
11 HSE1_HSF -0.42811.086/ 24622 -853-846 Upstream regionForward
12 HSE1_HSF -0.42811.086/ 24622 -22-15 Upstream regionForward
13 W_box_WRKY 1.14622.619/ 24622 -706-701 Upstream regionReverse
14 W_box_WRKY 1.14622.619/ 24622 1520 5'UTRReverse
15 W_box_WRKY 1.14622.619/ 24622 -495-490 Upstream regionReverse
16 W_box_WRKY 1.14622.619/ 24622 2328 5'UTRReverse

Details about the Gene : AT5G57890:


TAIR IDAT5G57890
Alternate NamesNIL(putative)
Chromosome Position23466906-23466849(chr5)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
DREB_AP2_EREBP
N_box_bHLH
Experimental Data from
Microarray Database 		--
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811

Download Sequence Data :

Click here to download AT5G57890 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012