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STIFDB - 1000bp Information | TAIR Gene ID: AT5G57870

STIFdb - 1000bp TFmap : AT5G57870

AT5G57870_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G57870

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.15200.987/ 24622 102107 5'UTRForward
2 Myb_box5_MYB 2.15200.987/ 24622 -558-553 Upstream regionForward
3 Myb_box5_MYB 2.15200.987/ 24622 -52-47 Upstream regionForward
4 Myb_box5_MYB 2.15200.987/ 24622 -449-444 Upstream regionReverse
5 Myb_box1_MYB 2.23962.427/ 24622 102107 5'UTRForward
6 Myb_box1_MYB 2.23962.427/ 24622 -558-553 Upstream regionForward
7 Myb_box1_MYB 2.23962.427/ 24622 -52-47 Upstream regionForward
8 Myb_box1_MYB 2.23962.427/ 24622 -449-444 Upstream regionReverse
9 DREB_AP2_EREBP 2.92861.615/ 24622 -431-426 Upstream regionForward
10 G_box2_bZIP 2.23701.580/ 24622 -881-876 Upstream regionReverse
11 AuxRE_ARF 2.86540.860/ 24622 2934 5'UTRForward
12 Nac_box_NAC 2.93971.450/ 24622 -478-473 Upstream regionForward
13 W_box_WRKY 1.45691.310/ 24622 -868-863 Upstream regionForward
14 W_box_WRKY 1.45691.310/ 24622 -715-710 Upstream regionForward
15 HSE1_HSF 1.64560.543/ 24622 -15-8 Upstream regionForward
16 Myb_box3_MYB 2.20571.088/ 24622 -64-59 Upstream regionForward

Details about the Gene : AT5G57870:


TAIR IDAT5G57870
Alternate NamesNIL(putative)
Chromosome Position23455724-23456980(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
Experimental Data from
Microarray Database 		RARGE-ABA, RARGE-COLD, RARGE-LIGHT, RARGE-REHYDRATION
References --

Download Sequence Data :

Click here to download AT5G57870 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012