STIFDB - 1000bp Information | TAIR Gene ID: AT5G55960


STIFdb - 1000bp TFmap : AT5G55960

AT5G55960_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G55960

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 3.07330.329/ 24622 -574-569 Upstream regionReverse
2 G_box_bHLH 3.58952.000/ 24622 -405-400 Upstream regionForward
3 GCC_box_AP2_EREBP 4.56725.371/ 24622 -974-969 Upstream regionForward
4 DREB_AP2_EREBP 3.64962.153/ 24622 -976-971 Upstream regionReverse
5 Nac_box_NAC 3.00601.934/ 24622 -250-245 Upstream regionForward
6 Myb_box3_MYB 2.32181.451/ 24622 -989-984 Upstream regionForward
7 Myb_box1_MYB 2.36900.809/ 24622 -493-488 Upstream regionReverse
8 AuxRE_ARF 2.90373.441/ 24622 3944 5'UTRReverse
9 AuxRE_ARF 2.90373.441/ 24622 -61-56 Upstream regionForward
10 AuxRE_ARF 2.90373.441/ 24622 -165-160 Upstream regionForward
11 HSE1_HSF 1.08910.724/ 24622 -885-878 Upstream regionForward
12 W_box_WRKY 2.35720.873/ 24622 -870-865 Upstream regionForward


Details about the Gene : AT5G55960:


TAIR IDAT5G55960
Alternate NamesNIL(putative)
Chromosome Position22678802-22679951(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
G_box_bHLH
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G55960 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012