STIFDB - 1000bp Information | TAIR Gene ID: AT5G55220


STIFdb - 1000bp TFmap : AT5G55220

AT5G55220_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G55220

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.75470.789/ 24622 -479-474 Upstream regionForward
2 Myb_box5_MYB 1.75470.789/ 24622 -996-991 Upstream regionForward
3 Myb_box5_MYB 1.75470.789/ 24622 -725-720 Upstream regionForward
4 GCC_box_AP2_EREBP 4.006812.891/ 24622 -300-295 Upstream regionForward
5 GCC_box_AP2_EREBP 4.006812.891/ 24622 -299-294 Upstream regionReverse
6 GCC_box_AP2_EREBP 4.006812.891/ 24622 -308-303 Upstream regionReverse
7 DREB_AP2_EREBP 2.42031.722/ 24622 -373-368 Upstream regionForward
8 G_box2_bZIP 1.85751.685/ 24622 -277-272 Upstream regionForward
9 N_box_bHLH 3.07772.537/ 24622 -323-318 Upstream regionForward
10 AuxRE_ARF 2.45333.670/ 24622 -514-509 Upstream regionReverse
11 AuxRE_ARF 2.45333.670/ 24622 2732 5'UTRReverse
12 AuxRE_ARF 2.45333.670/ 24622 -511-506 Upstream regionForward
13 AuxRE_ARF 2.45333.670/ 24622 -24-19 Upstream regionReverse
14 W_box_WRKY 1.94810.698/ 24622 -860-855 Upstream regionReverse
15 HSE1_HSF 0.47160.579/ 24622 -535-528 Upstream regionForward


Details about the Gene : AT5G55220:


TAIR IDAT5G55220
Alternate NamesNIL(putative)
Chromosome Position22413842-22414902(chr5)
Transcription FactorsG_box2_bZIP
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
DREB_AP2_EREBP
N_box_bHLH
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G55220 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012