STIFDB - 1000bp Information | TAIR Gene ID: AT5G55190


STIFdb - 1000bp TFmap : AT5G55190

AT5G55190_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G55190

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.76660.439/ 24622 -452-447 Upstream regionReverse
2 Myb_box2_MYB 2.61102.432/ 24622 -736-731 Upstream regionReverse
3 GCC_box_AP2_EREBP 4.07307.162/ 24622 6671 5'UTRForward
4 Nac_box_NAC 2.59102.578/ 24622 -830-825 Upstream regionReverse
5 Myb_box1_MYB 2.78351.079/ 24622 -452-447 Upstream regionReverse
6 Myb_box4_MYB 2.53724.089/ 24622 -655-649 Upstream regionReverse
7 AuxRE_ARF 2.42131.529/ 24622 2934 5'UTRReverse
8 HSE1_HSF 0.66610.965/ 24622 -933-926 Upstream regionForward
9 W_box_WRKY 1.26311.164/ 24622 -958-953 Upstream regionReverse


Details about the Gene : AT5G55190:


TAIR IDAT5G55190
Alternate NamesRAN3
Chromosome Position22408402-22409510(chr5)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
GCC_box_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-NACL
References --


Download Sequence Data :

Click here to download AT5G55190 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012