STIFDB - 1000bp Information | TAIR Gene ID: AT5G55180


STIFdb - 1000bp TFmap : AT5G55180

AT5G55180_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G55180

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box3_MYB 2.10671.246/ 5046 -895-890 Upstream region REVERSE
2 Myb_box5_MYB 1.94431.583/ 5046 -507-502 Upstream region FORWARD
3 Myb_box5_MYB 1.94431.583/ 5046 -801-796 Upstream region FORWARD
4 Myb_box5_MYB 1.94431.583/ 5046 -240-235 Upstream region REVERSE
5 Myb_box5_MYB 1.94431.583/ 5046 -531-526 Upstream region FORWARD
6 Myb_box5_MYB 1.94431.583/ 5046 -913-908 Upstream region FORWARD
7 Myb_box5_MYB 1.94431.583/ 5046 -911-906 Upstream region REVERSE
8 Myb_box1_MYB 2.11950.602/ 5046 -531-526 Upstream region FORWARD
9 W_box_WRKY 2.16361.304/ 5046 -645-640 Upstream region REVERSE
10 W_box_WRKY 2.16361.304/ 5046 -561-556 Upstream region REVERSE
11 Myb_box2_MYB 2.59652.875/ 5046 -78-73 Upstream region FORWARD
12 Myb_box2_MYB 2.59652.875/ 5046 -802-797 Upstream region REVERSE
13 G_box_bHLH 3.31851.502/ 5046 -87-82 Upstream region FORWARD
14 G_box2_bZIP 2.15101.625/ 5046 -307-302 Upstream region REVERSE
15 N_box_bHLH 2.63862.510/ 5046 -207-202 Upstream region FORWARD


Details about the Gene : AT5G55180:


TAIR IDAT5G55180
Alternate NamesNIL(putative)
Chromosome Position22388782-22390714 (chr5)
Transcription FactorsMyb_box3_MYB
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
G_box_bHLH
G_box2_bZIP
N_box_bHLH
Experimental Data from
Microarray Database
GEO-IRON, GEO-ALUMINIUM
References --


Download Sequence Data :

Click here to download AT5G55180 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012