STIFDB - 1000bp Information | TAIR Gene ID: AT5G54980


STIFdb - 1000bp TFmap : AT5G54980

AT5G54980_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G54980

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box3_MYB 2.25931.335/ 5046 -13-8 Upstream region FORWARD
2 Myb_box5_MYB 2.06712.262/ 5046 -514-509 Upstream region REVERSE
3 Myb_box5_MYB 2.06712.262/ 5046 -949-944 Upstream region REVERSE
4 Myb_box5_MYB 2.06712.262/ 5046 -512-507 Upstream region FORWARD
5 Myb_box5_MYB 2.06712.262/ 5046 -376-371 Upstream region FORWARD
6 Myb_box5_MYB 2.06712.262/ 5046 -341-336 Upstream region FORWARD
7 Myb_box5_MYB 2.06712.262/ 5046 9196 5`UTR FORWARD
8 Myb_box5_MYB 2.06712.262/ 5046 -947-942 Upstream region FORWARD
9 Myb_box5_MYB 2.06712.262/ 5046 -378-373 Upstream region REVERSE
10 Myb_box1_MYB 1.51740.645/ 5046 -13-8 Upstream region FORWARD
11 W_box_WRKY 1.59770.699/ 5046 -563-558 Upstream region FORWARD
12 Myb_box2_MYB 2.71841.540/ 5046 -948-943 Upstream region REVERSE
13 DREB_AP2_EREBP 2.78742.198/ 5046 -764-759 Upstream region FORWARD
14 Myb_box4_MYB 2.57953.029/ 5046 -768-762 Upstream region REVERSE


Details about the Gene : AT5G54980:


TAIR IDAT5G54980
Alternate NamesNIL(putative)
Chromosome Position22315699-22316601 (chr5)
Transcription FactorsMyb_box3_MYB
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
DREB_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
GEO-ABA
References --


Download Sequence Data :

Click here to download AT5G54980 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012