STIFDB - 1000bp Information | TAIR Gene ID: AT5G54860


STIFdb - 1000bp TFmap : AT5G54860

AT5G54860_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G54860

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.78682.096/ 5046 -82-77 Upstream region FORWARD
2 AuxRE_ARF 2.78682.096/ 5046 -895-890 Upstream region FORWARD
3 HSE1_HSF 1.47800.654/ 5046 -482-475 Upstream region REVERSE
4 Myb_box5_MYB 1.99411.413/ 5046 -692-687 Upstream region FORWARD
5 Myb_box5_MYB 1.99411.413/ 5046 -20-15 Upstream region FORWARD
6 Myb_box5_MYB 1.99411.413/ 5046 -405-400 Upstream region FORWARD
7 Myb_box5_MYB 1.99411.413/ 5046 -22-17 Upstream region REVERSE
8 Myb_box5_MYB 1.99411.413/ 5046 -92-87 Upstream region REVERSE
9 Myb_box1_MYB 2.09531.934/ 5046 -20-15 Upstream region FORWARD
10 Myb_box1_MYB 2.09531.934/ 5046 -22-17 Upstream region REVERSE
11 Myb_box1_MYB 2.09531.934/ 5046 -92-87 Upstream region REVERSE
12 G_box2_bZIP 2.11823.482/ 5046 -657-652 Upstream region FORWARD
13 G_box2_bZIP 2.11823.482/ 5046 -114-109 Upstream region FORWARD
14 Myb_box4_MYB 2.72703.029/ 5046 -435-429 Upstream region REVERSE


Details about the Gene : AT5G54860:


TAIR IDAT5G54860
Alternate NamesNIL(putative)
Chromosome Position22284581-22287206 (chr5)
Transcription FactorsAuxRE_ARF
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
G_box2_bZIP
Myb_box4_MYB
Experimental Data from
Microarray Database
GEO-NACL, GEO-HEAT, GEO-OSMOTIC
References --


Download Sequence Data :

Click here to download AT5G54860 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012