STIFDB - 1000bp Information | TAIR Gene ID: AT5G54810


STIFdb - 1000bp TFmap : AT5G54810

AT5G54810_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G54810

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.71201.184/ 24622 -311-306 Upstream regionReverse
2 Myb_box5_MYB 2.71201.184/ 24622 -157-152 Upstream regionReverse
3 Myb_box5_MYB 2.71201.184/ 24622 -475-470 Upstream regionReverse
4 Myb_box2_MYB 3.63532.189/ 24622 -314-309 Upstream regionForward
5 Myb_box1_MYB 2.01430.971/ 24622 -954-949 Upstream regionReverse
6 Nac_box_NAC 3.45356.962/ 24622 -355-350 Upstream regionForward
7 Nac_box_NAC 3.45356.962/ 24622 -278-273 Upstream regionForward
8 Nac_box_NAC 3.45356.962/ 24622 -22-17 Upstream regionForward
9 W_box_WRKY 2.80261.048/ 24622 -66-61 Upstream regionForward
10 Myb_box3_MYB 2.75031.741/ 24622 -954-949 Upstream regionReverse


Details about the Gene : AT5G54810:


TAIR IDAT5G54810
Alternate NamesTSB1, TRYPTOPHAN BIOSYNTHESIS 2, TRYPTOPHAN SYNTHASE BETA-SUBUNIT, TRP2, TRPB
Chromosome Position22284012-22283965(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
Nac_box_NAC
Experimental Data from
Microarray Database
DRASTIC-DROUGHT
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :

Click here to download AT5G54810 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012