STIFDB - 1000bp Information | TAIR Gene ID: AT5G54680


STIFdb - 1000bp TFmap : AT5G54680

AT5G54680_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G54680

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.90040.329/ 24622 6671 5'UTRForward
2 Myb_box2_MYB 2.84401.824/ 24622 -746-741 Upstream regionReverse
3 GCC_box_AP2_EREBP 4.258910.743/ 24622 122127 5'UTRReverse
4 GCC_box_AP2_EREBP 4.258910.743/ 24622 121126 5'UTRForward
5 Myb_box1_MYB 2.95880.809/ 24622 6671 5'UTRForward
6 N_box_bHLH 2.83303.171/ 24622 -764-759 Upstream regionForward
7 C_ABRE_bZIP 3.861218.824/ 24622 -33-28 Upstream regionForward
8 C_ABRE_bZIP 3.861218.824/ 24622 -36-31 Upstream regionReverse
9 HSE1_HSF 0.96722.172/ 24622 -737-730 Upstream regionForward
10 HSE1_HSF 0.96722.172/ 24622 202209 5'UTRForward
11 HSE1_HSF 0.96722.172/ 24622 129136 5'UTRForward
12 W_box_WRKY 2.24030.873/ 24622 -306-301 Upstream regionForward


Details about the Gene : AT5G54680:


TAIR IDAT5G54680
Alternate NamesNIL(putative)
Chromosome Position22233281-22234495(chr5)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
N_box_bHLH
GCC_box_AP2_EREBP
C_ABRE_bZIP
Experimental Data from
Microarray Database
RARGE-ABA, RARGE-NACL
References --


Download Sequence Data :

Click here to download AT5G54680 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012