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STIFDB - 1000bp Information | TAIR Gene ID: AT5G54060

STIFdb - 1000bp TFmap : AT5G54060

AT5G54060_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G54060

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 HSE1_HSF 0.56620.572/ 5046 -511-504 Upstream region REVERSE
2 Myb_box5_MYB 2.62510.742/ 5046 -758-753 Upstream region REVERSE
3 Myb_box5_MYB 2.62510.742/ 5046 -775-770 Upstream region FORWARD
4 Myb_box5_MYB 2.62510.742/ 5046 -660-655 Upstream region FORWARD
5 Myb_box1_MYB 2.68620.564/ 5046 -775-770 Upstream region FORWARD
6 W_box_WRKY 1.27011.222/ 5046 -301-296 Upstream region FORWARD
7 W_box_WRKY 1.27011.222/ 5046 -933-928 Upstream region REVERSE
8 Myb_box2_MYB 2.65911.348/ 5046 -807-802 Upstream region REVERSE
9 G_box_bHLH 3.12945.632/ 5046 -720-715 Upstream region FORWARD
10 G_box_bHLH 3.12945.632/ 5046 -155-150 Upstream region FORWARD
11 G_box_bHLH 3.12945.632/ 5046 -198-193 Upstream region FORWARD
12 G_box_bHLH 3.12945.632/ 5046 -833-828 Upstream region REVERSE
13 N_box_bHLH 2.52537.061/ 5046 -590-585 Upstream region REVERSE
14 N_box_bHLH 2.52537.061/ 5046 -723-718 Upstream region REVERSE
15 N_box_bHLH 2.52537.061/ 5046 -987-982 Upstream region REVERSE
16 G_box1_bZIP 3.949813.712/ 5046 -834-827 Upstream region REVERSE

Details about the Gene : AT5G54060:


TAIR IDAT5G54060
Alternate NamesUF3GT
Chromosome Position21936879-21938369 (chr5)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
G_box_bHLH
N_box_bHLH
G_box1_bZIP
Experimental Data from
Microarray Database 		GEO-NACL, GEO-UV-B, GEO-HEAT, GEO-OSMOTIC, GEO-WOUNDING
References

Download Sequence Data :

Click here to download AT5G54060 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012