STIFDB - 1000bp Information | TAIR Gene ID: AT5G53890


STIFdb - 1000bp TFmap : AT5G53890

AT5G53890_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G53890

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.57650.789/ 24622 -873-868 Upstream regionReverse
2 Myb_box5_MYB 2.57650.789/ 24622 -833-828 Upstream regionForward
3 AuxRE_ARF 3.12345.505/ 24622 -212-207 Upstream regionReverse
4 AuxRE_ARF 3.12345.505/ 24622 193198 5'UTRReverse
5 AuxRE_ARF 3.12345.505/ 24622 190195 5'UTRForward
6 AuxRE_ARF 3.12345.505/ 24622 -178-173 Upstream regionForward
7 Nac_box_NAC 3.25392.321/ 24622 130135 5'UTRForward
8 W_box_WRKY 1.78852.095/ 24622 -663-658 Upstream regionForward
9 W_box_WRKY 1.78852.095/ 24622 -640-635 Upstream regionForward
10 HSE1_HSF 2.09450.869/ 24622 -925-918 Upstream regionForward


Details about the Gene : AT5G53890:


TAIR IDAT5G53890
Alternate NamesNIL(putative)
Chromosome Position21893087-21894460(chr5)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Nac_box_NAC
Experimental Data from
Microarray Database
RARGE-NACL
References --


Download Sequence Data :

Click here to download AT5G53890 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012