STIFDB - 1000bp Information | TAIR Gene ID: AT5G53130


STIFdb - 1000bp TFmap : AT5G53130

AT5G53130_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G53130

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.52840.439/ 24622 -242-237 Upstream regionReverse
2 Myb_box1_MYB 1.78651.079/ 24622 -108-103 Upstream regionForward
3 AuxRE_ARF 3.05553.058/ 24622 359364 5'UTRReverse
4 AuxRE_ARF 3.05553.058/ 24622 2025 5'UTRReverse
5 W_box_WRKY 1.77683.492/ 24622 -805-800 Upstream regionReverse
6 W_box_WRKY 1.77683.492/ 24622 -441-436 Upstream regionForward
7 W_box_WRKY 1.77683.492/ 24622 -732-727 Upstream regionReverse
8 HSE1_HSF 1.24350.965/ 24622 -862-855 Upstream regionForward
9 Myb_box3_MYB 2.54461.935/ 24622 -108-103 Upstream regionForward


Details about the Gene : AT5G53130:


TAIR IDAT5G53130
Alternate NamesCNGC1, CYCLIC NUCLEOTIDE GATED CHANNEL 1, ATCNGC1
Chromosome Position21558256-21557717(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Experimental Data from
Microarray Database
RARGE-ABA
References --


Download Sequence Data :

Click here to download AT5G53130 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012