STIFDB - 1000bp Information | TAIR Gene ID: AT5G53120


STIFdb - 1000bp TFmap : AT5G53120

AT5G53120_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G53120

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.15600.395/ 24622 -457-452 Upstream regionReverse
2 Myb_box1_MYB 2.25910.971/ 24622 -457-452 Upstream regionReverse
3 DREB_AP2_EREBP 2.86512.584/ 24622 -923-918 Upstream regionForward
4 G_box2_bZIP 2.27495.056/ 24622 -837-832 Upstream regionForward
5 G_box2_bZIP 2.27495.056/ 24622 -794-789 Upstream regionForward
6 C_ABRE_bZIP 4.015911.294/ 24622 -773-768 Upstream regionForward
7 W_box_WRKY 1.57312.095/ 24622 -137-132 Upstream regionReverse
8 W_box_WRKY 1.57312.095/ 24622 -432-427 Upstream regionReverse
9 HSE1_HSF 0.93741.738/ 24622 -969-962 Upstream regionForward
10 HSE1_HSF 0.93741.738/ 24622 -974-967 Upstream regionForward


Details about the Gene : AT5G53120:


TAIR IDAT5G53120
Alternate NamesSPDS3, SPERMIDINE SYNTHASE 3, SPMS
Chromosome Position21550776-21552654(chr5)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
DREB_AP2_EREBP
C_ABRE_bZIP
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G53120 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012