STIFDB - 1000bp Information | TAIR Gene ID: AT5G52300


STIFdb - 1000bp TFmap : AT5G52300

AT5G52300_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G52300

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.74421.822/ 24622 -348-343 Upstream regionReverse
2 Myb_box5_MYB 1.74421.822/ 24622 -186-181 Upstream regionReverse
3 Myb_box5_MYB 1.74421.822/ 24622 -971-966 Upstream regionReverse
4 Myb_box5_MYB 1.74421.822/ 24622 -87-82 Upstream regionReverse
5 Myb_box5_MYB 1.74421.822/ 24622 -85-80 Upstream regionForward
6 Myb_box5_MYB 1.74421.822/ 24622 -916-911 Upstream regionForward
7 Myb_box2_MYB 2.65531.684/ 24622 -998-993 Upstream regionReverse
8 DREB_AP2_EREBP 2.43211.987/ 24622 -172-167 Upstream regionForward
9 G_box2_bZIP 2.56991.945/ 24622 -739-734 Upstream regionForward
10 Myb_box1_MYB 1.85350.747/ 24622 -85-80 Upstream regionForward
11 ABRE_ABI3_VP1 3.6326378.800/ 24622 -338-329 Upstream regionForward
12 N_box_bHLH 2.43942.927/ 24622 -280-275 Upstream regionReverse
13 HSE1_HSF -0.24270.668/ 24622 -850-843 Upstream regionForward


Details about the Gene : AT5G52300:


TAIR IDAT5G52300
Alternate NamesRD29B, RESPONSIVE TO DESSICATION 29B, LTI65
Chromosome Position21253282-21254430(chr5)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box2_MYB
DREB_AP2_EREBP
N_box_bHLH
ABRE_ABI3_VP1
Experimental Data from
Microarray Database
DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-DROUGHT
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :

Click here to download AT5G52300 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012