STIFDB - 1000bp Information | TAIR Gene ID: AT5G49830


STIFdb - 1000bp TFmap : AT5G49830

AT5G49830_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G49830

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.55340.439/ 24622 99104 5'UTRReverse
2 Myb_box5_MYB 2.55340.439/ 24622 -300-295 Upstream regionForward
3 GCC_box_AP2_EREBP 4.041425.066/ 24622 -397-392 Upstream regionReverse
4 GCC_box_AP2_EREBP 4.041425.066/ 24622 -401-396 Upstream regionForward
5 GCC_box_AP2_EREBP 4.041425.066/ 24622 -403-398 Upstream regionReverse
6 GCC_box_AP2_EREBP 4.041425.066/ 24622 -398-393 Upstream regionForward
7 GCC_box_AP2_EREBP 4.041425.066/ 24622 -400-395 Upstream regionReverse
8 GCC_box_AP2_EREBP 4.041425.066/ 24622 -413-408 Upstream regionForward
9 GCC_box_AP2_EREBP 4.041425.066/ 24622 -415-410 Upstream regionReverse
10 DREB_AP2_EREBP 2.43491.435/ 24622 -953-948 Upstream regionReverse
11 G_box2_bZIP 1.89942.809/ 24622 -447-442 Upstream regionForward
12 G_box2_bZIP 1.89942.809/ 24622 -480-475 Upstream regionForward
13 Myb_box1_MYB 2.61930.539/ 24622 -300-295 Upstream regionForward
14 Myb_box4_MYB 2.45522.045/ 24622 -866-860 Upstream regionReverse
15 AuxRE_ARF 2.50481.529/ 24622 -199-194 Upstream regionReverse
16 AuxRE_ARF 2.50481.529/ 24622 -193-188 Upstream regionForward
17 HSE1_HSF 1.22700.483/ 24622 -824-817 Upstream regionReverse
18 W_box_WRKY 1.98340.582/ 24622 -845-840 Upstream regionForward


Details about the Gene : AT5G49830:


TAIR IDAT5G49830
Alternate NamesNIL(putative)
Chromosome Position20272266-20271993(chr5)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
DREB_AP2_EREBP
GCC_box_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-REHYDRATION
References --


Download Sequence Data :

Click here to download AT5G49830 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012