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STIFDB - 1000bp Information | TAIR Gene ID: AT5G48850

STIFdb - 1000bp TFmap : AT5G48850

AT5G48850_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G48850

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box3_MYB 2.21173.298/ 5046 -425-420 Upstream region REVERSE
2 Myb_box3_MYB 2.21173.298/ 5046 -682-677 Upstream region REVERSE
3 Myb_box3_MYB 2.21173.298/ 5046 -267-262 Upstream region REVERSE
4 HSE1_HSF 0.91360.539/ 5046 -453-446 Upstream region FORWARD
5 Myb_box5_MYB 2.08761.630/ 5046 49 5`UTR FORWARD
6 Myb_box5_MYB 2.08761.630/ 5046 27 5`UTR REVERSE
7 Myb_box5_MYB 2.08761.630/ 5046 -324-319 Upstream region FORWARD
8 Myb_box5_MYB 2.08761.630/ 5046 -746-741 Upstream region FORWARD
9 Myb_box5_MYB 2.08761.630/ 5046 -167-162 Upstream region REVERSE
10 Myb_box5_MYB 2.08761.630/ 5046 -599-594 Upstream region REVERSE
11 Myb_box5_MYB 2.08761.630/ 5046 -736-731 Upstream region REVERSE
12 Myb_box1_MYB 2.22292.124/ 5046 27 5`UTR REVERSE
13 Myb_box1_MYB 2.22292.124/ 5046 -167-162 Upstream region REVERSE
14 Myb_box1_MYB 2.22292.124/ 5046 -599-594 Upstream region REVERSE
15 Myb_box1_MYB 2.22292.124/ 5046 -736-731 Upstream region REVERSE
16 G_box2_bZIP 2.27192.868/ 5046 -373-368 Upstream region FORWARD
17 G_box2_bZIP 2.27192.868/ 5046 -108-103 Upstream region FORWARD

Details about the Gene : AT5G48850:


TAIR IDAT5G48850
Alternate NamesATSDI1
Chromosome Position19805437-19807759 (chr5)
Transcription FactorsMyb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
G_box2_bZIP
Experimental Data from
Microarray Database 		GEO-WOUNDING
References

Download Sequence Data :

Click here to download AT5G48850 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012