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STIFDB - 1000bp Information | TAIR Gene ID: AT5G48540

STIFdb - 1000bp TFmap : AT5G48540

AT5G48540_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G48540

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box3_MYB 2.45712.199/ 5046 -366-361 Upstream region REVERSE
2 Myb_box3_MYB 2.45712.199/ 5046 -521-516 Upstream region REVERSE
3 HSE1_HSF 1.20621.616/ 5046 -316-309 Upstream region FORWARD
4 HSE1_HSF 1.20621.616/ 5046 -640-633 Upstream region FORWARD
5 HSE1_HSF 1.20621.616/ 5046 -456-449 Upstream region REVERSE
6 Myb_box5_MYB 2.36600.931/ 5046 -718-713 Upstream region REVERSE
7 Myb_box5_MYB 2.36600.931/ 5046 -145-140 Upstream region REVERSE
8 Myb_box5_MYB 2.36600.931/ 5046 -308-303 Upstream region FORWARD
9 Myb_box5_MYB 2.36600.931/ 5046 -218-213 Upstream region REVERSE
10 Myb_box1_MYB 2.49190.531/ 5046 -145-140 Upstream region REVERSE
11 W_box_WRKY 2.51121.726/ 5046 -341-336 Upstream region FORWARD
12 W_box_WRKY 2.51121.726/ 5046 -221-216 Upstream region FORWARD
13 W_box_WRKY 2.51121.726/ 5046 -79-74 Upstream region FORWARD
14 G_box_bHLH 3.74572.650/ 5046 -588-583 Upstream region REVERSE
15 G_box_bHLH 3.74572.650/ 5046 -333-328 Upstream region FORWARD
16 DREB_AP2_EREBP 3.11111.810/ 5046 -76-71 Upstream region FORWARD
17 G_box2_bZIP 2.48971.434/ 5046 -403-398 Upstream region FORWARD

Details about the Gene : AT5G48540:


TAIR IDAT5G48540
Alternate NamesNIL(putative)
Chromosome Position19668964-19669920 (chr5)
Transcription FactorsMyb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
G_box_bHLH
DREB_AP2_EREBP
G_box2_bZIP
Experimental Data from
Microarray Database 		GEO-LIGHT
References --

Download Sequence Data :

Click here to download AT5G48540 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012