Home | Browse | Search | Help | Blast | Group | Reference
 
 
 

STIFDB - 1000bp Information | TAIR Gene ID: AT5G48380

STIFdb - 1000bp TFmap : AT5G48380

AT5G48380_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G48380

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.31741.233/ 24622 257262 5'UTRReverse
2 Myb_box5_MYB 2.31741.233/ 24622 259264 5'UTRForward
3 Myb_box5_MYB 2.31741.233/ 24622 -370-365 Upstream regionReverse
4 Myb_box5_MYB 2.31741.233/ 24622 -989-984 Upstream regionReverse
5 Myb_box5_MYB 2.31741.233/ 24622 96101 5'UTRReverse
6 Myb_box1_MYB 2.46731.214/ 24622 -370-365 Upstream regionReverse
7 Myb_box1_MYB 2.46731.214/ 24622 96101 5'UTRReverse
8 N_box_bHLH 3.08752.378/ 24622 254259 5'UTRForward
9 AuxRE_ARF 3.05673.441/ 24622 -518-513 Upstream regionReverse
10 AuxRE_ARF 3.05673.441/ 24622 -592-587 Upstream regionReverse
11 AuxRE_ARF 3.05673.441/ 24622 2833 5'UTRForward
12 AuxRE_ARF 3.05673.441/ 24622 -533-528 Upstream regionReverse
13 HSE1_HSF 1.05891.086/ 24622 5360 5'UTRForward
14 HSE1_HSF 1.05891.086/ 24622 5865 5'UTRForward
15 Myb_box3_MYB 2.43392.177/ 24622 -375-370 Upstream regionForward
16 Myb_box3_MYB 2.43392.177/ 24622 -673-668 Upstream regionReverse

Details about the Gene : AT5G48380:


TAIR IDAT5G48380
Alternate NamesNIL(putative)
Chromosome Position19624286-19623759(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
AuxRE_ARF
N_box_bHLH
Experimental Data from
Microarray Database 		RARGE-LIGHT, RARGE-NACL
References --

Download Sequence Data :

Click here to download AT5G48380 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012