STIFDB - 1000bp Information | TAIR Gene ID: AT5G47420


STIFdb - 1000bp TFmap : AT5G47420

AT5G47420_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G47420

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.50041.128/ 5046 158163 5`UTR REVERSE
2 Myb_box3_MYB 1.83241.438/ 5046 -351-346 Upstream region REVERSE
3 HSE1_HSF 0.36020.704/ 5046 -368-361 Upstream region FORWARD
4 Myb_box5_MYB 1.76151.218/ 5046 -514-509 Upstream region FORWARD
5 Myb_box5_MYB 1.76151.218/ 5046 -37-32 Upstream region REVERSE
6 Myb_box5_MYB 1.76151.218/ 5046 -516-511 Upstream region REVERSE
7 Myb_box5_MYB 1.76151.218/ 5046 -82-77 Upstream region FORWARD
8 Myb_box1_MYB 1.04810.694/ 5046 -351-346 Upstream region REVERSE
9 W_box_WRKY 1.96600.752/ 5046 7883 5`UTR FORWARD
10 Myb_box2_MYB 2.71971.659/ 5046 -709-704 Upstream region REVERSE
11 G_box_bHLH 3.07123.466/ 5046 -49-44 Upstream region FORWARD
12 G_box_bHLH 3.07123.466/ 5046 -674-669 Upstream region FORWARD
13 G_box1_bZIP 3.861516.876/ 5046 -675-668 Upstream region FORWARD


Details about the Gene : AT5G47420:


TAIR IDAT5G47420
Alternate NamesNIL(putative)
Chromosome Position19232836-19235059 (chr5)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
G_box_bHLH
G_box1_bZIP
Experimental Data from
Microarray Database
GEO-UV-B
References --


Download Sequence Data :

Click here to download AT5G47420 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012