STIFDB - 1000bp Information | TAIR Gene ID: AT5G43470


STIFdb - 1000bp TFmap : AT5G43470

AT5G43470_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G43470

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.98670.718/ 24622 -505-500 Upstream regionReverse
2 Myb_box5_MYB 1.98670.718/ 24622 -322-317 Upstream regionReverse
3 Myb_box1_MYB 1.28650.883/ 24622 100105 5'UTRReverse
4 DREB_AP2_EREBP 2.74042.349/ 24622 -947-942 Upstream regionForward
5 Myb_box4_MYB 2.78223.346/ 24622 -504-498 Upstream regionReverse
6 AuxRE_ARF 2.76631.251/ 24622 813 5'UTRForward
7 Nac_box_NAC 2.72972.110/ 24622 -177-172 Upstream regionReverse
8 W_box_WRKY 1.38231.905/ 24622 -315-310 Upstream regionReverse
9 W_box_WRKY 1.38231.905/ 24622 -417-412 Upstream regionForward
10 HSE1_HSF 0.64640.790/ 24622 -129-122 Upstream regionReverse
11 Myb_box3_MYB 2.06561.583/ 24622 100105 5'UTRReverse


Details about the Gene : AT5G43470:


TAIR IDAT5G43470
Alternate NamesRPP8, RESISTANT TO CMV(Y), RECOGNITION OF PERONOSPORA PARASITICA 8, DISEASE RESISTANCE PROTEIN RPP8, HRT, RCY1
Chromosome Position17484677-17483887(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-ABA, RARGE-NACL
References --


Download Sequence Data :

Click here to download AT5G43470 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012