STIFDB - 1000bp Information | TAIR Gene ID: AT5G42740


STIFdb - 1000bp TFmap : AT5G42740

AT5G42740_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G42740

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.76820.263/ 24622 -710-705 Upstream regionForward
2 G_box_bHLH 3.26661.600/ 24622 1520 5'UTRForward
3 GCC_box_AP2_EREBP 4.20294.297/ 24622 -219-214 Upstream regionReverse
4 G_box2_bZIP 2.10181.685/ 24622 -804-799 Upstream regionReverse
5 Myb_box3_MYB 2.06602.322/ 24622 -387-382 Upstream regionReverse
6 Myb_box3_MYB 2.06602.322/ 24622 -745-740 Upstream regionForward
7 Myb_box1_MYB 2.82350.647/ 24622 -710-705 Upstream regionForward
8 HBE_HB 1.378010.259/ 24622 -559-551 Upstream regionForward
9 C_ABRE_bZIP 3.78717.530/ 24622 -15-10 Upstream regionForward
10 N_box_bHLH 3.32842.537/ 24622 -894-889 Upstream regionForward
11 HSE1_HSF 1.46621.738/ 24622 93100 5'UTRForward
12 HSE1_HSF 1.46621.738/ 24622 18 5'UTRForward
13 HSE1_HSF 1.46621.738/ 24622 119126 5'UTRReverse
14 W_box_WRKY 1.38531.397/ 24622 -137-132 Upstream regionForward
15 W_box_WRKY 1.38531.397/ 24622 -567-562 Upstream regionReverse


Details about the Gene : AT5G42740:


TAIR IDAT5G42740
Alternate NamesNIL(putative)
Chromosome Position17151987-17153307(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
G_box_bHLH
N_box_bHLH
GCC_box_AP2_EREBP
C_ABRE_bZIP
HBE_HB
Experimental Data from
Microarray Database
RARGE-ABA
References --


Download Sequence Data :

Click here to download AT5G42740 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012