STIFDB - 1000bp Information | TAIR Gene ID: AT5G41600


STIFdb - 1000bp TFmap : AT5G41600

AT5G41600_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G41600

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.84150.987/ 24622 -250-245 Upstream regionReverse
2 Myb_box5_MYB 1.84150.987/ 24622 -189-184 Upstream regionForward
3 Myb_box5_MYB 1.84150.987/ 24622 -385-380 Upstream regionForward
4 G_box_bHLH 3.09976.000/ 24622 -616-611 Upstream regionForward
5 G_box_bHLH 3.09976.000/ 24622 -518-513 Upstream regionForward
6 G_box_bHLH 3.09976.000/ 24622 -604-599 Upstream regionForward
7 GCC_box_AP2_EREBP 4.01515.371/ 24622 -211-206 Upstream regionReverse
8 DREB_AP2_EREBP 3.12802.153/ 24622 -209-204 Upstream regionForward
9 Nac_box_NAC 2.57651.934/ 24622 -805-800 Upstream regionForward
10 Myb_box3_MYB 1.96691.451/ 24622 -422-417 Upstream regionReverse
11 Myb_box1_MYB 1.96310.809/ 24622 -189-184 Upstream regionForward
12 HSE1_HSF 0.68260.724/ 24622 -838-831 Upstream regionForward


Details about the Gene : AT5G41600:


TAIR IDAT5G41600
Alternate NamesVIRB2-INTERACTING PROTEIN 3, BTI3
Chromosome Position16652358-16653457(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
Nac_box_NAC
DREB_AP2_EREBP
G_box_bHLH
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-COLD
References --


Download Sequence Data :

Click here to download AT5G41600 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012