STIFDB - 1000bp Information | TAIR Gene ID: AT5G40850


STIFdb - 1000bp TFmap : AT5G40850

AT5G40850_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G40850

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.90500.846/ 24622 6267 5'UTRReverse
2 Myb_box5_MYB 1.90500.846/ 24622 -408-403 Upstream regionForward
3 Myb_box5_MYB 1.90500.846/ 24622 -736-731 Upstream regionForward
4 Myb_box2_MYB 2.64801.563/ 24622 -409-404 Upstream regionReverse
5 GCC_box_AP2_EREBP 4.26604.604/ 24622 143148 5'UTRForward
6 G_box2_bZIP 2.02061.806/ 24622 -525-520 Upstream regionReverse
7 Nac_box_NAC 2.67121.658/ 24622 3540 5'UTRForward
8 Myb_box3_MYB 2.00511.244/ 24622 -916-911 Upstream regionReverse
9 Myb_box1_MYB 2.03140.693/ 24622 6267 5'UTRReverse
10 HBE_HB 2.053410.992/ 24622 -47-39 Upstream regionReverse
11 AuxRE_ARF 2.57091.966/ 24622 -373-368 Upstream regionForward
12 AuxRE_ARF 2.57091.966/ 24622 2631 5'UTRForward
13 HSE1_HSF 0.59181.241/ 24622 99106 5'UTRForward
14 HSE1_HSF 0.59181.241/ 24622 -64-57 Upstream regionReverse


Details about the Gene : AT5G40850:


TAIR IDAT5G40850
Alternate NamesUPM1, UROPHORPHYRIN METHYLASE 1
Chromosome Position16382698-16384432(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
GCC_box_AP2_EREBP
HBE_HB
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G40850 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012