STIFDB - 1000bp Information | TAIR Gene ID: AT5G40780


STIFdb - 1000bp TFmap : AT5G40780

AT5G40780_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G40780

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 3.15902.096/ 5046 -844-839 Upstream region REVERSE
2 Myb_box3_MYB 2.55855.340/ 5046 -293-288 Upstream region FORWARD
3 Myb_box3_MYB 2.55855.340/ 5046 -538-533 Upstream region REVERSE
4 HSE1_HSF 1.33031.308/ 5046 127134 5`UTR REVERSE
5 Myb_box5_MYB 2.51090.565/ 5046 -315-310 Upstream region FORWARD
6 Myb_box1_MYB 2.63051.290/ 5046 -315-310 Upstream region FORWARD
7 Myb_box4_MYB 3.24786.058/ 5046 -235-229 Upstream region REVERSE


Details about the Gene : AT5G40780:


TAIR IDAT5G40780
Alternate NamesLHT1
Chromosome Position16323651-16327281 (chr5)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
Myb_box4_MYB
Experimental Data from
Microarray Database
GEO-COLD, GEO-DROUGHT, GEO-UV-B
References --


Download Sequence Data :

Click here to download AT5G40780 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012