STIFDB - 1000bp Information | TAIR Gene ID: AT5G39660


STIFdb - 1000bp TFmap : AT5G39660

AT5G39660_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G39660

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 3.28721.630/ 5046 117122 5`UTR REVERSE
2 HSE1_HSF 0.62322.035/ 5046 -948-941 Upstream region FORWARD
3 HSE1_HSF 0.62322.035/ 5046 -414-407 Upstream region FORWARD
4 Myb_box5_MYB 2.62881.759/ 5046 -303-298 Upstream region FORWARD
5 Myb_box5_MYB 2.62881.759/ 5046 4853 5`UTR REVERSE
6 Myb_box5_MYB 2.62881.759/ 5046 5055 5`UTR FORWARD
7 Myb_box5_MYB 2.62881.759/ 5046 -789-784 Upstream region REVERSE
8 G_box_bHLH 4.10882.503/ 5046 -105-100 Upstream region FORWARD
9 G_box2_bZIP 2.80932.709/ 5046 -96-91 Upstream region FORWARD


Details about the Gene : AT5G39660:


TAIR IDAT5G39660
Alternate NamesCDF2
Chromosome Position15878699-15881044 (chr5)
Transcription FactorsAuxRE_ARF
HSE1_HSF
Myb_box5_MYB
G_box_bHLH
G_box2_bZIP
Experimental Data from
Microarray Database
GEO-COLD, GEO-DROUGHT, GEO-UV-B
References --


Download Sequence Data :

Click here to download AT5G39660 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012