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STIFDB - 1000bp Information | TAIR Gene ID: AT5G38700

STIFdb - 1000bp TFmap : AT5G38700

AT5G38700_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G38700

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 HSE1_HSF 0.77490.539/ 5046 -777-770 Upstream region REVERSE
2 Myb_box5_MYB 1.96952.328/ 5046 -919-914 Upstream region REVERSE
3 Myb_box5_MYB 1.96952.328/ 5046 -948-943 Upstream region FORWARD
4 Myb_box5_MYB 1.96952.328/ 5046 -950-945 Upstream region REVERSE
5 Myb_box5_MYB 1.96952.328/ 5046 -644-639 Upstream region REVERSE
6 Myb_box5_MYB 1.96952.328/ 5046 -652-647 Upstream region FORWARD
7 Myb_box5_MYB 1.96952.328/ 5046 -671-666 Upstream region FORWARD
8 Myb_box5_MYB 1.96952.328/ 5046 -968-963 Upstream region REVERSE
9 Myb_box5_MYB 1.96952.328/ 5046 -799-794 Upstream region REVERSE
10 Myb_box5_MYB 1.96952.328/ 5046 -642-637 Upstream region FORWARD
11 Myb_box5_MYB 1.96952.328/ 5046 -654-649 Upstream region REVERSE
12 Myb_box1_MYB 2.11361.593/ 5046 -919-914 Upstream region REVERSE
13 Myb_box1_MYB 2.11361.593/ 5046 -950-945 Upstream region REVERSE
14 Myb_box1_MYB 2.11361.593/ 5046 -642-637 Upstream region FORWARD
15 W_box_WRKY 2.28400.575/ 5046 -173-168 Upstream region REVERSE
16 Myb_box2_MYB 2.82761.268/ 5046 -999-994 Upstream region REVERSE
17 N_box_bHLH 3.33702.215/ 5046 -791-786 Upstream region FORWARD

Details about the Gene : AT5G38700:


TAIR IDAT5G38700
Alternate NamesNIL(putative)
Chromosome Position15489594-15490399 (chr5)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
N_box_bHLH
Experimental Data from
Microarray Database 		GEO-LIGHT
References --

Download Sequence Data :

Click here to download AT5G38700 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012