STIFDB - 1000bp Information | TAIR Gene ID: AT5G27840


STIFdb - 1000bp TFmap : AT5G27840

AT5G27840_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G27840

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.55510.718/ 24622 105110 5'UTRReverse
2 Myb_box5_MYB 2.55510.718/ 24622 110115 5'UTRForward
3 Myb_box4_MYB 3.26033.346/ 24622 -773-767 Upstream regionReverse
4 Nac_box_NAC 3.23956.329/ 24622 -845-840 Upstream regionForward
5 Nac_box_NAC 3.23956.329/ 24622 -660-655 Upstream regionReverse
6 Nac_box_NAC 3.23956.329/ 24622 -842-837 Upstream regionReverse
7 W_box_WRKY 2.58033.810/ 24622 -312-307 Upstream regionForward
8 W_box_WRKY 2.58033.810/ 24622 -672-667 Upstream regionForward
9 W_box_WRKY 2.58033.810/ 24622 3944 5'UTRForward
10 W_box_WRKY 2.58033.810/ 24622 -332-327 Upstream regionForward
11 HSE1_HSF 1.30710.790/ 24622 -680-673 Upstream regionForward


Details about the Gene : AT5G27840:


TAIR IDAT5G27840
Alternate NamesTOPP8
Chromosome Position9865043-9864833(chr5)
Transcription FactorsHSE1_HSF
Myb_box5_MYB
W_box_WRKY
Nac_box_NAC
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-ABA
References --


Download Sequence Data :

Click here to download AT5G27840 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012