STIFDB - 1000bp Information | TAIR Gene ID: AT5G27720


STIFdb - 1000bp TFmap : AT5G27720

AT5G27720_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G27720

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.96430.911/ 24622 -212-207 Upstream regionForward
2 Myb_box5_MYB 2.96430.911/ 24622 -214-209 Upstream regionReverse
3 Myb_box5_MYB 2.96430.911/ 24622 -608-603 Upstream regionForward
4 Myb_box2_MYB 2.89971.684/ 24622 5156 5'UTRReverse
5 G_box2_bZIP 2.92741.945/ 24622 -604-599 Upstream regionReverse
6 Nac_box_NAC 2.80533.570/ 24622 -855-850 Upstream regionReverse
7 Nac_box_NAC 2.80533.570/ 24622 -547-542 Upstream regionForward
8 Myb_box3_MYB 2.15961.339/ 24622 -594-589 Upstream regionReverse
9 Myb_box1_MYB 2.98020.747/ 24622 -212-207 Upstream regionForward
10 Myb_box4_MYB 2.75202.831/ 24622 -105-99 Upstream regionForward
11 HSE1_HSF 0.77300.668/ 24622 106113 5'UTRForward
12 W_box_WRKY 2.21981.612/ 24622 1318 5'UTRForward
13 W_box_WRKY 2.21981.612/ 24622 -531-526 Upstream regionReverse


Details about the Gene : AT5G27720:


TAIR IDAT5G27720
Alternate NamesEMBRYO DEFECTIVE 1644, EMB1644
Chromosome Position9814560-9815907(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
Nac_box_NAC
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-REHYDRATION
References --


Download Sequence Data :

Click here to download AT5G27720 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012