STIFDB - 1000bp Information | TAIR Gene ID: AT5G22250


STIFdb - 1000bp TFmap : AT5G22250

AT5G22250_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G22250

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.87982.445/ 5046 -390-385 Upstream region REVERSE
2 AuxRE_ARF 2.87982.445/ 5046 -656-651 Upstream region FORWARD
3 HSE1_HSF 0.93280.763/ 5046 -161-154 Upstream region FORWARD
4 Myb_box5_MYB 3.06410.660/ 5046 130135 5`UTR REVERSE
5 Myb_box5_MYB 3.06410.660/ 5046 -698-693 Upstream region FORWARD
6 Myb_box1_MYB 2.31310.752/ 5046 -379-374 Upstream region REVERSE
7 W_box_WRKY 1.55110.815/ 5046 -350-345 Upstream region FORWARD
8 Myb_box2_MYB 2.96101.797/ 5046 -699-694 Upstream region REVERSE
9 C_ABRE_bZIP 4.17068.410/ 5046 171176 5`UTR REVERSE
10 G_box2_bZIP 2.30192.031/ 5046 -713-708 Upstream region FORWARD
11 Nac_box_NAC 2.96853.594/ 5046 -404-399 Upstream region FORWARD
12 Nac_box_NAC 2.96853.594/ 5046 -717-712 Upstream region FORWARD


Details about the Gene : AT5G22250:


TAIR IDAT5G22250
Alternate NamesAtCAF1b, AtCAF1b
Chromosome Position7365532-7366778 (chr5)
Transcription FactorsAuxRE_ARF
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
C_ABRE_bZIP
G_box2_bZIP
Nac_box_NAC
Experimental Data from
Microarray Database
GEO-LIGHT
References --


Download Sequence Data :

Click here to download AT5G22250 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012