STIFDB - 1000bp Information | TAIR Gene ID: AT5G17920


STIFdb - 1000bp TFmap : AT5G17920

AT5G17920_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G17920

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.14371.645/ 24622 -263-258 Upstream regionReverse
2 Myb_box5_MYB 2.14371.645/ 24622 -588-583 Upstream regionReverse
3 Myb_box5_MYB 2.14371.645/ 24622 3540 5'UTRForward
4 Myb_box5_MYB 2.14371.645/ 24622 -794-789 Upstream regionReverse
5 Myb_box5_MYB 2.14371.645/ 24622 -541-536 Upstream regionReverse
6 Myb_box2_MYB 2.75533.648/ 24622 -587-582 Upstream regionReverse
7 Myb_box2_MYB 2.75533.648/ 24622 123128 5'UTRForward
8 Myb_box1_MYB 2.30250.809/ 24622 -263-258 Upstream regionReverse
9 Nac_box_NAC 2.96011.934/ 24622 -881-876 Upstream regionReverse
10 W_box_WRKY 1.55240.873/ 24622 -251-246 Upstream regionReverse
11 Myb_box3_MYB 2.27112.902/ 24622 -395-390 Upstream regionReverse
12 Myb_box3_MYB 2.27112.902/ 24622 -770-765 Upstream regionForward


Details about the Gene : AT5G17920:


TAIR IDAT5G17920
Alternate NamesATMETS, ATMS1, ATCIMS, COBALAMIN-INDEPENDENT METHIONINE SYNTHASE
Chromosome Position5934040-5935772(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
Nac_box_NAC
Experimental Data from
Microarray Database
RARGE-COLD, RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G17920 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012