STIFDB - 1000bp Information | TAIR Gene ID: AT5G17460


STIFdb - 1000bp TFmap : AT5G17460

AT5G17460_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G17460

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.05590.658/ 24622 -854-849 Upstream regionForward
2 Myb_box5_MYB 2.05590.658/ 24622 188193 5'UTRForward
3 Myb_box5_MYB 2.05590.658/ 24622 159164 5'UTRReverse
4 G_box_bHLH 3.36811.333/ 24622 -236-231 Upstream regionForward
5 DREB_AP2_EREBP 3.41192.871/ 24622 -138-133 Upstream regionForward
6 DREB_AP2_EREBP 3.41192.871/ 24622 -324-319 Upstream regionForward
7 G_box2_bZIP 2.17191.404/ 24622 -768-763 Upstream regionReverse
8 Nac_box_NAC 2.78922.578/ 24622 110115 5'UTRReverse
9 Nac_box_NAC 2.78922.578/ 24622 498503 5'UTRReverse
10 Myb_box3_MYB 2.14750.967/ 24622 -315-310 Upstream regionReverse
11 Myb_box1_MYB 1.42720.539/ 24622 -315-310 Upstream regionReverse
12 Myb_box4_MYB 2.72232.045/ 24622 623629 5'UTRReverse
13 HBE_HB 2.16598.549/ 24622 -342-334 Upstream regionForward
14 HSE1_HSF 0.11080.483/ 24622 547554 5'UTRForward
15 W_box_WRKY 2.21582.328/ 24622 208213 5'UTRReverse
16 W_box_WRKY 2.21582.328/ 24622 -692-687 Upstream regionReverse
17 W_box_WRKY 2.21582.328/ 24622 748753 5'UTRForward
18 W_box_WRKY 2.21582.328/ 24622 -299-294 Upstream regionForward


Details about the Gene : AT5G17460:


TAIR IDAT5G17460
Alternate NamesNIL(putative)
Chromosome Position5759722-5758870(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Nac_box_NAC
DREB_AP2_EREBP
G_box_bHLH
Myb_box4_MYB
HBE_HB
Experimental Data from
Microarray Database
DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-ABA, RARGE-COLD, RARGE-DROUGHT, RARGE-NACL
References --


Download Sequence Data :

Click here to download AT5G17460 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012