STIFDB - 1000bp Information | TAIR Gene ID: AT5G16620


STIFdb - 1000bp TFmap : AT5G16620

AT5G16620_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G16620

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 3.11991.128/ 24622 -742-737 Upstream regionReverse
2 Myb_box5_MYB 3.11991.128/ 24622 -740-735 Upstream regionForward
3 GCC_box_AP2_EREBP 4.71459.208/ 24622 -402-397 Upstream regionReverse
4 Myb_box1_MYB 3.14292.774/ 24622 -742-737 Upstream regionReverse
5 Myb_box1_MYB 3.14292.774/ 24622 -740-735 Upstream regionForward
6 Nac_box_NAC 2.94613.315/ 24622 -245-240 Upstream regionReverse
7 HSE1_HSF 0.08251.241/ 24622 -999-992 Upstream regionForward


Details about the Gene : AT5G16620:


TAIR IDAT5G16620
Alternate NamesATTIC40, TIC40, PDE120, PIGMENT DEFECTIVE EMBRYO
Chromosome Position5449699-5450810(chr5)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
Nac_box_NAC
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G16620 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012