STIFDB - 1000bp Information | TAIR Gene ID: AT5G16380


STIFdb - 1000bp TFmap : AT5G16380

AT5G16380_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G16380

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.78965.334/ 5046 -174-169 Upstream region REVERSE
2 AuxRE_ARF 2.78965.334/ 5046 -410-405 Upstream region REVERSE
3 AuxRE_ARF 2.78965.334/ 5046 -746-741 Upstream region REVERSE
4 AuxRE_ARF 2.78965.334/ 5046 -340-335 Upstream region REVERSE
5 Myb_box3_MYB 2.21693.398/ 5046 -706-701 Upstream region REVERSE
6 Myb_box3_MYB 2.21693.398/ 5046 -87-82 Upstream region REVERSE
7 Myb_box5_MYB 3.03661.079/ 5046 611 5`UTR REVERSE
8 Myb_box5_MYB 3.03661.079/ 5046 -396-391 Upstream region FORWARD
9 Myb_box5_MYB 3.03661.079/ 5046 1419 5`UTR FORWARD
10 Myb_box1_MYB 3.05800.821/ 5046 611 5`UTR REVERSE
11 N_box_bHLH 3.62293.423/ 5046 -384-379 Upstream region REVERSE


Details about the Gene : AT5G16380:


TAIR IDAT5G16380
Alternate NamesNIL(putative)
Chromosome Position5359363-5360710 (chr5)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
Myb_box5_MYB
Myb_box1_MYB
N_box_bHLH
Experimental Data from
Microarray Database
GEO-HEAT, GEO-OSMOTIC
References --


Download Sequence Data :

Click here to download AT5G16380 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012