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STIFDB - 1000bp Information | TAIR Gene ID: AT5G15850

STIFdb - 1000bp TFmap : AT5G15850

AT5G15850_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT5G15850

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.15071.842/ 24622 338343 5'UTRReverse
2 Myb_box5_MYB 1.15071.842/ 24622 401406 5'UTRForward
3 Myb_box5_MYB 1.15071.842/ 24622 150155 5'UTRReverse
4 Myb_box5_MYB 1.15071.842/ 24622 337342 5'UTRForward
5 Myb_box5_MYB 1.15071.842/ 24622 340345 5'UTRForward
6 Myb_box5_MYB 1.15071.842/ 24622 -877-872 Upstream regionReverse
7 Myb_box5_MYB 1.15071.842/ 24622 399404 5'UTRReverse
8 G_box_bHLH 3.42581.600/ 24622 291296 5'UTRForward
9 DREB_AP2_EREBP 2.76745.167/ 24622 246251 5'UTRReverse
10 DREB_AP2_EREBP 2.76745.167/ 24622 242247 5'UTRReverse
11 DREB_AP2_EREBP 2.76745.167/ 24622 -295-290 Upstream regionForward
12 AuxRE_ARF 2.77980.918/ 24622 -896-891 Upstream regionReverse
13 Nac_box_NAC 2.80921.547/ 24622 4146 5'UTRForward
14 W_box_WRKY 2.20931.397/ 24622 -648-643 Upstream regionForward
15 W_box_WRKY 2.20931.397/ 24622 -298-293 Upstream regionForward

Details about the Gene : AT5G15850:


TAIR IDAT5G15850
Alternate NamesCOL1, CONSTANS-LIKE 1
Chromosome Position5177901-5177477(chr5)
Transcription FactorsMyb_box5_MYB
W_box_WRKY
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
G_box_bHLH
Experimental Data from
Microarray Database 		DRASTIC-COLD, DRASTIC-DROUGHT, DRASTIC-NACL, RARGE-ABA, RARGE-DROUGHT, RARGE-LIGHT, RARGE-NACL
References --

Download Sequence Data :

Click here to download AT5G15850 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012