STIFDB - 1000bp Information | TAIR Gene ID: AT5G13740


STIFdb - 1000bp TFmap : AT5G13740

AT5G13740_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G13740

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.11630.526/ 24622 -787-782 Upstream regionForward
2 Myb_box5_MYB 2.11630.526/ 24622 -215-210 Upstream regionReverse
3 G_box_bHLH 3.41001.600/ 24622 -279-274 Upstream regionForward
4 Myb_box2_MYB 2.90471.459/ 24622 143148 5'UTRReverse
5 G_box2_bZIP 2.21021.685/ 24622 -977-972 Upstream regionForward
6 Nac_box_NAC 2.81933.094/ 24622 -137-132 Upstream regionForward
7 Nac_box_NAC 2.81933.094/ 24622 5762 5'UTRForward
8 Myb_box3_MYB 2.18952.322/ 24622 -917-912 Upstream regionReverse
9 Myb_box3_MYB 2.18952.322/ 24622 -697-692 Upstream regionReverse
10 Myb_box1_MYB 1.46631.295/ 24622 -917-912 Upstream regionReverse
11 Myb_box1_MYB 1.46631.295/ 24622 -697-692 Upstream regionReverse
12 AuxRE_ARF 2.76181.835/ 24622 223228 5'UTRReverse
13 AuxRE_ARF 2.76181.835/ 24622 -165-160 Upstream regionForward
14 HSE1_HSF 0.14040.579/ 24622 -234-227 Upstream regionReverse
15 W_box_WRKY 2.26130.698/ 24622 -66-61 Upstream regionReverse


Details about the Gene : AT5G13740:


TAIR IDAT5G13740
Alternate NamesZINC INDUCED FACILITATOR 1, ZIF1
Chromosome Position4431309-4432691(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
G_box_bHLH
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G13740 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012