STIFDB - 1000bp Information | TAIR Gene ID: AT5G13100


STIFdb - 1000bp TFmap : AT5G13100

AT5G13100_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G13100

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.82050.897/ 24622 -568-563 Upstream regionForward
2 Myb_box5_MYB 1.82050.897/ 24622 -289-284 Upstream regionReverse
3 Myb_box5_MYB 1.82050.897/ 24622 -537-532 Upstream regionForward
4 Myb_box5_MYB 1.82050.897/ 24622 110115 5'UTRReverse
5 Myb_box5_MYB 1.82050.897/ 24622 -41-36 Upstream regionForward
6 G_box_bHLH 3.09232.182/ 24622 -97-92 Upstream regionForward
7 G_box_bHLH 3.09232.182/ 24622 -262-257 Upstream regionReverse
8 Myb_box2_MYB 2.57260.995/ 24622 -374-369 Upstream regionReverse
9 DREB_AP2_EREBP 2.49091.174/ 24622 -146-141 Upstream regionReverse
10 G_box2_bZIP 1.94081.149/ 24622 5560 5'UTRReverse
11 Nac_box_NAC 2.59152.110/ 24622 -392-387 Upstream regionForward
12 Nac_box_NAC 2.59152.110/ 24622 -265-260 Upstream regionForward
13 Myb_box3_MYB 1.94000.792/ 24622 49 5'UTRForward
14 Myb_box1_MYB 1.94630.883/ 24622 110115 5'UTRReverse
15 Myb_box1_MYB 1.94630.883/ 24622 -289-284 Upstream regionReverse
16 Myb_box4_MYB 2.47241.673/ 24622 -328-322 Upstream regionReverse
17 N_box_bHLH 2.45853.460/ 24622 -397-392 Upstream regionReverse
18 N_box_bHLH 2.45853.460/ 24622 -428-423 Upstream regionForward
19 AuxRE_ARF 2.47591.251/ 24622 -304-299 Upstream regionForward
20 AuxRE_ARF 2.47591.251/ 24622 3338 5'UTRReverse
21 HSE1_HSF -0.10470.790/ 24622 119126 5'UTRReverse
22 HSE1_HSF -0.10470.790/ 24622 -938-931 Upstream regionReverse


Details about the Gene : AT5G13100:


TAIR IDAT5G13100
Alternate NamesNIL(putative)
Chromosome Position4155663-4156791(chr5)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
G_box_bHLH
N_box_bHLH
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT5G13100 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012