STIFDB - 1000bp Information | TAIR Gene ID: AT5G10540


STIFdb - 1000bp TFmap : AT5G10540

AT5G10540_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G10540

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.17221.161/ 24622 -713-708 Upstream regionForward
2 Myb_box5_MYB 2.17221.161/ 24622 -207-202 Upstream regionReverse
3 Myb_box5_MYB 2.17221.161/ 24622 -820-815 Upstream regionReverse
4 Myb_box5_MYB 2.17221.161/ 24622 -200-195 Upstream regionForward
5 Myb_box5_MYB 2.17221.161/ 24622 -461-456 Upstream regionReverse
6 Myb_box2_MYB 2.92961.287/ 24622 -206-201 Upstream regionReverse
7 GCC_box_AP2_EREBP 4.76473.791/ 24622 -11-6 Upstream regionReverse
8 Myb_box3_MYB 2.33353.073/ 24622 1318 5'UTRReverse
9 Myb_box3_MYB 2.33353.073/ 24622 -644-639 Upstream regionReverse
10 Myb_box3_MYB 2.33353.073/ 24622 -543-538 Upstream regionReverse
11 Myb_box1_MYB 2.36280.571/ 24622 -461-456 Upstream regionReverse
12 Myb_box4_MYB 2.80812.165/ 24622 -536-530 Upstream regionReverse
13 AuxRE_ARF 3.03470.810/ 24622 -955-950 Upstream regionReverse
14 HSE1_HSF 0.14371.022/ 24622 -609-602 Upstream regionReverse
15 HSE1_HSF 0.14371.022/ 24622 -471-464 Upstream regionReverse
16 W_box_WRKY 2.42041.233/ 24622 -253-248 Upstream regionReverse
17 W_box_WRKY 2.42041.233/ 24622 -982-977 Upstream regionForward


Details about the Gene : AT5G10540:


TAIR IDAT5G10540
Alternate NamesNIL(putative)
Chromosome Position3327093-3328119(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
GCC_box_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-ABA, RARGE-NACL
References --


Download Sequence Data :

Click here to download AT5G10540 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012