STIFDB - 1000bp Information | TAIR Gene ID: AT5G02500


STIFdb - 1000bp TFmap : AT5G02500

AT5G02500_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G02500

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.86610.329/ 24622 -172-167 Upstream regionReverse
2 G_box_bHLH 3.53482.000/ 24622 -252-247 Upstream regionForward
3 GCC_box_AP2_EREBP 4.42195.371/ 24622 2025 5'UTRForward
4 Nac_box_NAC 2.99251.934/ 24622 -166-161 Upstream regionReverse
5 Myb_box1_MYB 2.23880.809/ 24622 -942-937 Upstream regionReverse
6 AuxRE_ARF 2.83393.441/ 24622 6368 5'UTRReverse
7 AuxRE_ARF 2.83393.441/ 24622 -895-890 Upstream regionReverse
8 AuxRE_ARF 2.83393.441/ 24622 -892-887 Upstream regionForward
9 HSE1_HSF 0.91732.172/ 24622 -128-121 Upstream regionForward
10 HSE1_HSF 0.91732.172/ 24622 -133-126 Upstream regionForward
11 HSE1_HSF 0.91732.172/ 24622 -970-963 Upstream regionReverse
12 W_box_WRKY 2.26790.873/ 24622 -70-65 Upstream regionForward


Details about the Gene : AT5G02500:


TAIR IDAT5G02500
Alternate NamesHSC70-1, AT-HSC70-1, HSC70, HSP70-1
Chromosome Position556440-556333(chr5)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
Nac_box_NAC
G_box_bHLH
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
--
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :

Click here to download AT5G02500 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012