STIFDB - 1000bp Information | TAIR Gene ID: AT5G02260


STIFdb - 1000bp TFmap : AT5G02260

AT5G02260_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G02260

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.04721.214/ 24622 -652-647 Upstream regionReverse
2 Myb_box5_MYB 2.04721.214/ 24622 -862-857 Upstream regionForward
3 Myb_box5_MYB 2.04721.214/ 24622 5863 5'UTRReverse
4 Myb_box5_MYB 2.04721.214/ 24622 -864-859 Upstream regionReverse
5 GCC_box_AP2_EREBP 4.16489.916/ 24622 -556-551 Upstream regionForward
6 GCC_box_AP2_EREBP 4.16489.916/ 24622 -555-550 Upstream regionReverse
7 Myb_box1_MYB 2.16881.494/ 24622 5863 5'UTRReverse
8 Myb_box1_MYB 2.16881.494/ 24622 -864-859 Upstream regionReverse
9 DREB_AP2_EREBP 3.31731.987/ 24622 -427-422 Upstream regionForward
10 G_box2_bZIP 2.82491.945/ 24622 -688-683 Upstream regionForward
11 C_ABRE_bZIP 3.778417.376/ 24622 -621-616 Upstream regionForward
12 C_ABRE_bZIP 3.778417.376/ 24622 -595-590 Upstream regionForward
13 W_box_WRKY 2.22480.806/ 24622 -479-474 Upstream regionForward


Details about the Gene : AT5G02260:


TAIR IDAT5G02260
Alternate NamesATEXPA9, ARABIDOPSIS THALIANA EXPANSIN A9, ATEXP9, ATHEXP ALPHA 1.10, EXP9
Chromosome Position462156-463221(chr5)
Transcription FactorsG_box2_bZIP
Myb_box1_MYB
Myb_box5_MYB
W_box_WRKY
DREB_AP2_EREBP
GCC_box_AP2_EREBP
C_ABRE_bZIP
Experimental Data from
Microarray Database
RARGE-COLD
References --


Download Sequence Data :

Click here to download AT5G02260 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012