STIFDB - 1000bp Information | TAIR Gene ID: AT5G01850


STIFdb - 1000bp TFmap : AT5G01850

AT5G01850_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G01850

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.68842.096/ 5046 127132 5`UTR FORWARD
2 AuxRE_ARF 2.68842.096/ 5046 -563-558 Upstream region FORWARD
3 Myb_box3_MYB 2.11022.670/ 5046 115120 5`UTR FORWARD
4 Myb_box3_MYB 2.11022.670/ 5046 7782 5`UTR FORWARD
5 HSE1_HSF 0.78311.308/ 5046 -869-862 Upstream region REVERSE
6 HSE1_HSF 0.78311.308/ 5046 258265 5`UTR FORWARD
7 Myb_box5_MYB 2.78370.283/ 5046 467472 5`UTR FORWARD
8 Myb_box1_MYB 2.85740.645/ 5046 467472 5`UTR FORWARD
9 W_box_WRKY 1.43450.699/ 5046 303308 5`UTR REVERSE
10 G_box_bHLH 3.27871.609/ 5046 -121-116 Upstream region FORWARD
11 DREB_AP2_EREBP 2.65362.198/ 5046 -212-207 Upstream region REVERSE
12 N_box_bHLH 2.66445.380/ 5046 -233-228 Upstream region FORWARD
13 N_box_bHLH 2.66445.380/ 5046 195200 5`UTR FORWARD
14 Nac_box_NAC 2.71341.540/ 5046 -469-464 Upstream region FORWARD


Details about the Gene : AT5G01850:


TAIR IDAT5G01850
Alternate NamesNIL(putative)
Chromosome Position332337-334470 (chr5)
Transcription FactorsAuxRE_ARF
Myb_box3_MYB
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
G_box_bHLH
DREB_AP2_EREBP
N_box_bHLH
Nac_box_NAC
Experimental Data from
Microarray Database
GEO-COLD, GEO-DROUGHT, GEO-UV-B
References --


Download Sequence Data :

Click here to download AT5G01850 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012