STIFDB - 1000bp Information | TAIR Gene ID: AT5G01600


STIFdb - 1000bp TFmap : AT5G01600

AT5G01600_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT5G01600

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.53600.740/ 24622 330335 5'UTRForward
2 Myb_box5_MYB 2.53600.740/ 24622 -435-430 Upstream regionReverse
3 Myb_box5_MYB 2.53600.740/ 24622 127132 5'UTRReverse
4 G_box_bHLH 3.11003.000/ 24622 314319 5'UTRForward
5 G_box_bHLH 3.11003.000/ 24622 -906-901 Upstream regionReverse
6 Myb_box2_MYB 2.45821.368/ 24622 -544-539 Upstream regionForward
7 GCC_box_AP2_EREBP 3.95104.028/ 24622 273278 5'UTRForward
8 DREB_AP2_EREBP 2.45511.615/ 24622 -892-887 Upstream regionReverse
9 Nac_box_NAC 2.61761.450/ 24622 -874-869 Upstream regionForward
10 Myb_box3_MYB 1.96651.088/ 24622 -34-29 Upstream regionReverse
11 G_box1_bZIP 3.789416.371/ 24622 313320 5'UTRForward
12 Myb_box1_MYB 2.66071.214/ 24622 330335 5'UTRForward
13 Myb_box1_MYB 2.66071.214/ 24622 127132 5'UTRReverse
14 AuxRE_ARF 2.54860.860/ 24622 -333-328 Upstream regionForward
15 HSE1_HSF 0.66170.543/ 24622 -566-559 Upstream regionReverse
16 W_box_WRKY 1.29060.655/ 24622 -228-223 Upstream regionReverse


Details about the Gene : AT5G01600:


TAIR IDAT5G01600
Alternate NamesATFER1
Chromosome Position230049-229592(chr5)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
G_box1_bZIP
G_box_bHLH
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
DRASTIC-COLD, DRASTIC-DROUGHT, RARGE-NACL
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :

Click here to download AT5G01600 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012