STIFDB - 1000bp Information | TAIR Gene ID: AT4G39520


STIFdb - 1000bp TFmap : AT4G39520

AT4G39520_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT4G39520

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 1.06921.316/ 24622 -167-162 Upstream regionForward
2 Myb_box5_MYB 1.06921.316/ 24622 -98-93 Upstream regionForward
3 Myb_box5_MYB 1.06921.316/ 24622 -149-144 Upstream regionReverse
4 Myb_box5_MYB 1.06921.316/ 24622 -474-469 Upstream regionReverse
5 Myb_box5_MYB 1.06921.316/ 24622 96101 5'UTRReverse
6 Myb_box5_MYB 1.06921.316/ 24622 -169-164 Upstream regionReverse
7 DREB_AP2_EREBP 3.32561.435/ 24622 -886-881 Upstream regionForward
8 G_box2_bZIP 1.97771.404/ 24622 163168 5'UTRForward
9 Myb_box3_MYB 1.97250.967/ 24622 96101 5'UTRReverse
10 Myb_box1_MYB 1.20510.539/ 24622 96101 5'UTRReverse
11 AuxRE_ARF 2.63272.294/ 24622 169174 5'UTRForward
12 AuxRE_ARF 2.63272.294/ 24622 8085 5'UTRForward
13 AuxRE_ARF 2.63272.294/ 24622 183188 5'UTRReverse
14 HBE_HB 1.29048.549/ 24622 -536-528 Upstream regionReverse
15 HSE1_HSF -0.23320.483/ 24622 -455-448 Upstream regionReverse
16 W_box_WRKY 1.29661.746/ 24622 -282-277 Upstream regionReverse
17 W_box_WRKY 1.29661.746/ 24622 192197 5'UTRForward
18 W_box_WRKY 1.29661.746/ 24622 -289-284 Upstream regionReverse


Details about the Gene : AT4G39520:


TAIR IDAT4G39520
Alternate NamesNIL(putative)
Chromosome Position18374199-18373995(chr4)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
DREB_AP2_EREBP
HBE_HB
Experimental Data from
Microarray Database
RARGE-NACL
References --


Download Sequence Data :

Click here to download AT4G39520 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012