STIFDB - 1000bp Information | TAIR Gene ID: AT4G39090


STIFdb - 1000bp TFmap : AT4G39090

AT4G39090_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT4G39090

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 3.09290.493/ 24622 -307-302 Upstream regionReverse
2 G_box_bHLH 3.63573.000/ 24622 -136-131 Upstream regionForward
3 Myb_box1_MYB 3.15041.214/ 24622 -307-302 Upstream regionReverse
4 DREB_AP2_EREBP 2.97943.230/ 24622 -409-404 Upstream regionReverse
5 N_box_bHLH 3.69599.514/ 24622 -200-195 Upstream regionReverse
6 N_box_bHLH 3.69599.514/ 24622 -202-197 Upstream regionForward
7 AuxRE_ARF 2.94381.720/ 24622 -278-273 Upstream regionForward
8 HSE1_HSF 0.98511.086/ 24622 -997-990 Upstream regionReverse


Details about the Gene : AT4G39090:


TAIR IDAT4G39090
Alternate NamesRD19, EMBRYO DEFECTIVE 3005, RESPONSIVE TO DEHYDRATION 19, EMB3005, RD19A
Chromosome Position18217477-18217321(chr4)
Transcription FactorsMyb_box1_MYB
HSE1_HSF
Myb_box5_MYB
AuxRE_ARF
DREB_AP2_EREBP
G_box_bHLH
N_box_bHLH
Experimental Data from
Microarray Database
DRASTIC-DROUGHT, RARGE-ABA, RARGE-NACL
References Elizabeth A. Bray, 2002. Annals of Botany 89:803-811


Download Sequence Data :

Click here to download AT4G39090 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012