STIFDB - 1000bp Information | TAIR Gene ID: AT3G56950


STIFdb - 1000bp TFmap : AT3G56950

AT3G56950_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G56950

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 3.02330.304/ 24622 9196 5'UTRForward
2 Myb_box1_MYB 3.10170.747/ 24622 9196 5'UTRForward
3 DREB_AP2_EREBP 3.64611.987/ 24622 5358 5'UTRReverse
4 N_box_bHLH 2.93062.927/ 24622 -35-30 Upstream regionForward
5 AuxRE_ARF 2.94804.235/ 24622 -899-894 Upstream regionForward
6 AuxRE_ARF 2.94804.235/ 24622 -912-907 Upstream regionReverse
7 AuxRE_ARF 2.94804.235/ 24622 -993-988 Upstream regionReverse
8 AuxRE_ARF 2.94804.235/ 24622 2126 5'UTRForward
9 HSE1_HSF 1.77200.668/ 24622 -329-322 Upstream regionForward
10 Myb_box3_MYB 2.28635.358/ 24622 -145-140 Upstream regionForward
11 Myb_box3_MYB 2.28635.358/ 24622 -457-452 Upstream regionForward
12 Myb_box3_MYB 2.28635.358/ 24622 -713-708 Upstream regionReverse
13 Myb_box3_MYB 2.28635.358/ 24622 3136 5'UTRReverse


Details about the Gene : AT3G56950:


TAIR IDAT3G56950
Alternate NamesSIP2;1, SMALL AND BASIC INTRINSIC PROTEIN 2
Chromosome Position21090811-21090624(chr3)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
AuxRE_ARF
DREB_AP2_EREBP
N_box_bHLH
Experimental Data from
Microarray Database
RARGE-COLD
References --


Download Sequence Data :

Click here to download AT3G56950 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012