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STIFDB - 1000bp Information | TAIR Gene ID: AT3G56190

STIFdb - 1000bp TFmap : AT3G56190

AT3G56190_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT3G56190

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.69211.834/ 5046 510 5`UTR FORWARD
2 AuxRE_ARF 2.69211.834/ 5046 -668-663 Upstream region REVERSE
3 HSE1_HSF 1.50760.572/ 5046 -652-645 Upstream region FORWARD
4 Myb_box5_MYB 1.95701.484/ 5046 -643-638 Upstream region REVERSE
5 Myb_box5_MYB 1.95701.484/ 5046 -434-429 Upstream region FORWARD
6 Myb_box5_MYB 1.95701.484/ 5046 -635-630 Upstream region FORWARD
7 Myb_box5_MYB 1.95701.484/ 5046 -529-524 Upstream region FORWARD
8 Myb_box5_MYB 1.95701.484/ 5046 -169-164 Upstream region FORWARD
9 Myb_box5_MYB 1.95701.484/ 5046 -729-724 Upstream region REVERSE
10 Myb_box1_MYB 2.05601.693/ 5046 -434-429 Upstream region FORWARD
11 Myb_box1_MYB 2.05601.693/ 5046 -643-638 Upstream region REVERSE
12 Myb_box1_MYB 2.05601.693/ 5046 -169-164 Upstream region FORWARD
13 W_box_WRKY 2.16190.611/ 5046 -333-328 Upstream region REVERSE
14 G_box_bHLH 3.29971.408/ 5046 -946-941 Upstream region FORWARD
15 Nac_box_NAC 2.71982.696/ 5046 -367-362 Upstream region FORWARD
16 Nac_box_NAC 2.71982.696/ 5046 -403-398 Upstream region FORWARD

Details about the Gene : AT3G56190:


TAIR IDAT3G56190
Alternate NamesALPHA-SNAP2, ALPHA-SNAP2
Chromosome Position20845674-20848534 (chr3)
Transcription FactorsAuxRE_ARF
HSE1_HSF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
G_box_bHLH
Nac_box_NAC
Experimental Data from
Microarray Database 		GEO-ALUMINIUM
References --

Download Sequence Data :

Click here to download AT3G56190 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012