STIFDB - 1000bp Information | TAIR Gene ID: AT3G55840


STIFdb - 1000bp TFmap : AT3G55840

AT3G55840_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G55840

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.34020.282/ 24622 -427-422 Upstream regionForward
2 Myb_box2_MYB 3.07221.563/ 24622 -643-638 Upstream regionReverse
3 DREB_AP2_EREBP 3.77481.845/ 24622 -156-151 Upstream regionReverse
4 G_box2_bZIP 2.54373.611/ 24622 -511-506 Upstream regionReverse
5 G_box2_bZIP 2.54373.611/ 24622 -91-86 Upstream regionForward
6 Nac_box_NAC 3.25391.658/ 24622 -615-610 Upstream regionForward
7 Myb_box3_MYB 2.48461.244/ 24622 -256-251 Upstream regionForward
8 Myb_box1_MYB 1.73350.693/ 24622 -256-251 Upstream regionForward
9 Myb_box4_MYB 2.95722.629/ 24622 -623-617 Upstream regionReverse
10 AuxRE_ARF 3.05861.966/ 24622 2732 5'UTRReverse
11 AuxRE_ARF 3.05861.966/ 24622 -670-665 Upstream regionReverse
12 HSE1_HSF 0.41240.621/ 24622 -356-349 Upstream regionReverse
13 W_box_WRKY 1.76981.497/ 24622 -140-135 Upstream regionForward
14 W_box_WRKY 1.76981.497/ 24622 -420-415 Upstream regionReverse


Details about the Gene : AT3G55840:


TAIR IDAT3G55840
Alternate NamesNIL(putative)
Chromosome Position20729846-20729796(chr3)
Transcription FactorsG_box2_bZIP
Myb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
Nac_box_NAC
DREB_AP2_EREBP
Myb_box4_MYB
Experimental Data from
Microarray Database
RARGE-LIGHT
References --


Download Sequence Data :

Click here to download AT3G55840 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012