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STIFDB - 1000bp Information | TAIR Gene ID: AT3G55360

STIFdb - 1000bp TFmap : AT3G55360

AT3G55360_1000.png

Details of 1000bp TFmap | TAIR Gene ID: AT3G55360

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 AuxRE_ARF 2.87642.096/ 5046 -890-885 Upstream region FORWARD
2 AuxRE_ARF 2.87642.096/ 5046 96101 5`UTR FORWARD
3 Myb_box5_MYB 2.26291.413/ 5046 -37-32 Upstream region REVERSE
4 Myb_box5_MYB 2.26291.413/ 5046 -963-958 Upstream region REVERSE
5 Myb_box5_MYB 2.26291.413/ 5046 -929-924 Upstream region REVERSE
6 Myb_box5_MYB 2.26291.413/ 5046 -216-211 Upstream region FORWARD
7 Myb_box5_MYB 2.26291.413/ 5046 -913-908 Upstream region FORWARD
8 Myb_box1_MYB 2.35661.290/ 5046 -929-924 Upstream region REVERSE
9 Myb_box1_MYB 2.35661.290/ 5046 -963-958 Upstream region REVERSE
10 W_box_WRKY 2.35161.397/ 5046 -690-685 Upstream region FORWARD
11 W_box_WRKY 2.35161.397/ 5046 -306-301 Upstream region FORWARD
12 Myb_box2_MYB 3.06523.081/ 5046 -914-909 Upstream region REVERSE
13 Myb_box2_MYB 3.06523.081/ 5046 -582-577 Upstream region REVERSE
14 Nac_box_NAC 3.01581.540/ 5046 -657-652 Upstream region FORWARD

Details about the Gene : AT3G55360:


TAIR IDAT3G55360
Alternate NamesATTSC13, ATTSC13, ATTSC13, ATTSC13
Chromosome Position20520930-20523014 (chr3)
Transcription FactorsAuxRE_ARF
Myb_box5_MYB
Myb_box1_MYB
W_box_WRKY
Myb_box2_MYB
Nac_box_NAC
Experimental Data from
Microarray Database 		GEO-IRON
References --

Download Sequence Data :

Click here to download AT3G55360 [1000bp + UTR] Region in Fasta format
 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012