STIFDB - 1000bp Information | TAIR Gene ID: AT3G55120


STIFdb - 1000bp TFmap : AT3G55120

AT3G55120_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G55120

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.98200.718/ 24622 -938-933 Upstream regionForward
2 Myb_box5_MYB 2.98200.718/ 24622 4146 5'UTRForward
3 G_box_bHLH 3.72482.182/ 24622 -88-83 Upstream regionForward
4 Myb_box2_MYB 2.94465.969/ 24622 -45-40 Upstream regionForward
5 Myb_box2_MYB 2.94465.969/ 24622 -660-655 Upstream regionReverse
6 Myb_box2_MYB 2.94465.969/ 24622 4045 5'UTRReverse
7 DREB_AP2_EREBP 2.93402.349/ 24622 4348 5'UTRForward
8 Myb_box3_MYB 2.40701.583/ 24622 -139-134 Upstream regionReverse
9 Myb_box1_MYB 2.41130.883/ 24622 -366-361 Upstream regionForward
10 AuxRE_ARF 3.22121.251/ 24622 1217 5'UTRReverse
11 W_box_WRKY 1.79200.952/ 24622 -976-971 Upstream regionReverse


Details about the Gene : AT3G55120:


TAIR IDAT3G55120
Alternate NamesTT5, CHALCONE FLAVANONE ISOMERASE, CHALCONE ISOMERASE, TRANSPARENT TESTA 5, CHI, A11, CFI
Chromosome Position20442448-20442393(chr3)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
Myb_box5_MYB
W_box_WRKY
Myb_box2_MYB
AuxRE_ARF
DREB_AP2_EREBP
G_box_bHLH
Experimental Data from
Microarray Database
DRASTIC-COLD
References --


Download Sequence Data :

Click here to download AT3G55120 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012