STIFDB - 1000bp Information | TAIR Gene ID: AT3G53570


STIFdb - 1000bp TFmap : AT3G53570

AT3G53570_1000.png


Details of 1000bp TFmap | TAIR Gene ID: AT3G53570

No: Transcription Factor Z - Score Normalisation Score Start Residue End Residue Chromosome Location Orientation
1 Myb_box5_MYB 2.49900.395/ 24622 -490-485 Upstream regionForward
2 GCC_box_AP2_EREBP 3.88976.446/ 24622 -627-622 Upstream regionForward
3 Myb_box3_MYB 1.88401.741/ 24622 -101-96 Upstream regionForward
4 Myb_box1_MYB 2.58890.971/ 24622 -490-485 Upstream regionForward
5 AuxRE_ARF 2.45632.753/ 24622 115120 5'UTRReverse
6 AuxRE_ARF 2.45632.753/ 24622 -590-585 Upstream regionReverse
7 N_box_bHLH 3.00953.806/ 24622 -662-657 Upstream regionReverse
8 HSE1_HSF 0.57380.869/ 24622 -649-642 Upstream regionForward
9 W_box_WRKY 1.22062.095/ 24622 -693-688 Upstream regionForward
10 W_box_WRKY 1.22062.095/ 24622 -952-947 Upstream regionForward


Details about the Gene : AT3G53570:


TAIR IDAT3G53570
Alternate NamesAFC1, ARABIDOPSIS FUS3-COMPLEMENTING GENE 1, CLK/STY (LAMMER-TYPE) PROTEIN KINASE, AME2
Chromosome Position19875567-19875104(chr3)
Transcription FactorsMyb_box3_MYB
Myb_box1_MYB
HSE1_HSF
Myb_box5_MYB
W_box_WRKY
AuxRE_ARF
N_box_bHLH
GCC_box_AP2_EREBP
Experimental Data from
Microarray Database
RARGE-ABA, RARGE-COLD, RARGE-DROUGHT, RARGE-NACL
References --


Download Sequence Data :

Click here to download AT3G53570 [1000bp + UTR] Region in Fasta format

 
 
           

Contact :

Prof. R. Sowdhamini

STIFDB TEAM :

Prof. R. Sowdhamini | Shameer Khader
Mahantesha Naika B. N. | Oommen K. M.

Last Updated :

15th Oct, 2012